BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H02LP1|AL427959
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1030 1475 0.0
3x_Contig1506 217 2e-56
>3x_Contig1030
Length = 5200
Score = 1475 bits (740), Expect = 0.0
Identities = 751/756 (99%), Gaps = 1/756 (0%)
Strand = Plus / Plus
Query: 5 tacacttrtctcgtataaggagctcttcaacagttctacttcaatttgaatctaaactta 64
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4440 tacacttgtctcgtataagg-gctcttcaacagttctacttcaatttgaatctaaactta 4498
Query: 65 ctgtacagttcttatatttctgcaacgatttatgtatatcaaaatatattatacacgggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4499 ctgtacagttcttatatttctgcaacgatttatgtatatcaaaatatattatacacgggt 4558
Query: 125 agctaacattgcgttgaaacaaaggctgaaattacatatacactctttgtacgtcagtaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4559 agctaacattgcgttgaaacaaaggctgaaattacatatacactctttgtacgtcagtaa 4618
Query: 185 ccctgctaaatgcgtaaatatcgtagcgccaatgagtaatatcccggtaatcgggcctaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4619 ccctgctaaatgcgtaaatatcgtagcgccaatgagtaatatcccggtaatcgggcctaa 4678
Query: 245 tttggtatttcttctcatcattcgacagtagttagacatatgtagtacctggttagtgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4679 tttggtatttcttctcatcattcgacagtagttagacatatgtagtacctggttagtgtt 4738
Query: 305 accctacgttggtgatgcgttgatcagatattgaaaacttcaaattggcagaaaccgaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4739 accctacgttggtgatgcgttgatcagatattgaaaacttcaaattggcagaaaccgaat 4798
Query: 365 atagaaagaataaggaaaagtagcacagctgcacatcatcaattgaatatattaaccaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 atagaaagaataaggaaaagtagcacagctgcacatcatcaattgaatatattaaccaac 4858
Query: 425 gcgcgtgtcttttacaactttacgcttattgaacatcactcgcttttaaattacagatag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4859 gcgcgtgtcttttacaactttacgcttattgaacatcactcgcttttaaattacagatag 4918
Query: 485 tacgtatctcctataagtgctttgaaagggatattataaaagaaaataagacgtatgaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 tacgtatctcctataagtgctttgaaagggatattataaaagaaaataagacgtatgaga 4978
Query: 545 ttacagtagagaacagtggacgaatataatmagttaaagaagaatagagcatgtmacaaa 604
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 4979 ttacagtagagaacagtggacgaatataatcagttaaagaagaatagagcatgtcacaaa 5038
Query: 605 ggaaattacaacaagaagttgataaggtattgaagaaggtgaaggaagggttggaagaat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 ggaaattacaacaagaagttgataaggtattgaagaaggtgaaggaagggttggaagaat 5098
Query: 665 atgaggatatatatgaaaaattccaaaacacagaatcagataaccaatcttacagggaaa 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 atgaggatatatatgaaaaattccaaaacacagaatcagataaccaatcttacagggaaa 5158
Query: 725 agmttgaatccgatttgaaacgtgaaataaagaagt 760
|| |||||||||||||||||||||||||||||||||
Sbjct: 5159 agcttgaatccgatttgaaacgtgaaataaagaagt 5194
>3x_Contig1506
Length = 7652
Score = 217 bits (109), Expect = 2e-56
Identities = 115/119 (96%)
Strand = Plus / Plus
Query: 742 aaacgtgaaataaagaagttgcagaaacatagagaacagatmaagaattggttgagmaaa 801
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1 aaacgtgaaataaagaagttgcagaaacatagagaacagatcaagaattggttgagcaaa 60
Query: 802 gatgatatcaaggatagagcagatgttttgatggagaaccgtagactcattkagagcgg 860
|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 61 gatgatatcaaggatagagcagatgtgttgatggagaaccgtagactcattgagagcgg 119
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7393
Number of Sequences: 1807
Number of extensions: 7393
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 2
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)